Q-Bio-Mn
Rejection-free kinetic Monte Carlo simulation of multivalent biomolecular interactions
Networks with the Smallest Average Distance and the Largest Average Clustering
Updating Probabilities: A Complex Agent Based Example
Potential for regulatory genetic networks of gene expression near a stable point
Integration of a Phosphatase Cascade with the MAP Kinase Pathway provides for a Novel Signal Processing Function
Global Sensitivity Analysis of Biochemical Reaction Networks via Semidefinite Programming
Information capacity of genetic regulatory elements
Type-dependent irreversible stochastic spin models for genetic regulatory networks at the level of promotion-inhibition circuitry
Statistical properties of multistep enzyme-mediated reactions
Estimating time-varying networks
Fluctuations in Gene Regulatory Networks as Gaussian Colored Noise
Global alignment of protein-protein interaction networks by graph matching methods
Quantifying mRNA synthesis and decay rates using small RNAs
Searching bifurcations in high-dimensional parameter space via a feedback loop breaking approach
From statistical mechanics to information theory: understanding biophysical information-processing systems
The window at the edge of chaos in a simple model of gene interaction networks
Optimizing information flow in small genetic networks. II: Feed forward interactions
Accomplishments in Genome-Scale In Silico Modeling for Industrial and Medical Biotechnology
Calibration and validation of a genetic regulatory network model describing the production of the gap gene protein Hunchback in emph{Drosophila} early development
Enzymatic AND-Gate Based on Electrode-Immobilized Glucose-6-Phosphate Dehydrogenase: Towards Digital Biosensors and Biochemical Logic Systems with Low Noise
Robustness of the Drosophila segment polarity network to transient perturbations
Spontaneous Reaction Silencing in Metabolic Optimization
