Q-Bio-Mn
Reverse engineering time discrete finite dynamical systems: A feasible undertaking?
Mathematical modeling of 1,2-propanediol utilization bacterial microcompartments in vivo activity
Primordial Evolution in the Finitary Process Soup
Protein-Interaction-Networks: More than mere modules
The solution space of metabolic networks: producibility, robustness and fluctuations
Bistable MAP Kinase Activity: A Plausible Mechanism Contributing to Maintenance of Late Long-Term Potentiation
mRNA diffusion explains protein gradients in textit{Drosophila} early development
Incorporating postleap checks in tau-leaping
Rule-based Modeling and Simulation of Biochemical Systems with Molecular Finite Automata
Systems approaches and algorithms for discovery of combinatorial therapies
Evolution of complex modular biological networks
A Design of an Autonomous Molecule Loading/Transporting/Unloading System Using DNA Hybridization and Biomolecular Linear Motors
On Cycles in the Transcription Network of Saccharomyces cerevisiae
Spontaneous Emergence of Modularity in a Model of Evolving Individuals and in Real Networks
Dynamical modeling of microRNA action on the protein translation process
Python Unleashed on Systems Biology
MAPK Cascades as Feedback Amplifiers
Statistical physics of a model binary genetic switch with linear feedback
Propagation of external regulation and asynchronous dynamics in random Boolean networks
A network model with structured nodes
Network Structure and Dynamics, and Emergence of Robustness by Stabilizing Selection in an Artificial Genome
Evolution of a population of random Boolean networks