Q-Bio-Mn
Mixed membership analysis of high-throughput interaction studies: Relational data
A statistical mechanics approach to reverse engineering: sparsity and biological priors on gene regulatory networks
Introducing a Probabilistic Structure on Sequential Dynamical Systems, Simulation and Reduction of Probabilistic Sequential Networks
Regulatory networks and connected components of the neutral space
Damage Spreading in Spatial and Small-world Random Boolean Networks
Cell biology: Networks, regulation, pathways
Dynamics of gene expression and the regulatory inference problem
Equilibrium-like behavior in far-from-equilibrium chemical reaction networks
A Model of Sequential Branching in Hierarchical Cell Fate Determination
Diffusion, dimensionality and noise in transcriptional regulation
Non-equilibrium dynamics of gene expression and the Jarzynski equality
Enzyme localization can drastically affect signal amplification in signal transduction pathways
Propagation of large concentration changes in reversible protein binding networks
Cell-to-Cell stochastic fluctuations in apoptotic signaling can decide between life and death
Comparing Classical Pathways and Modern Networks: Towards the Development of an Edge Ontology
Ascorbic acid enhances the inhibitory effect of aspirin on neuronal cyclooxygenase-2-mediated prostaglandin E2 production
A modified Next Reaction Method for simulating chemical systems with time dependent propensities and delays
Estimating the size of the solution space of metabolic networks
Learning and innovative elements of strategy adoption rules expand cooperative network topologies
Transcription and noise in negative feedback loops
Modular model building
Functions of Bifans in Context of Multiple Regulatory Motifs in Signaling Networks
