All posts under category "Condensed Matter / Cond-Mat.stat-Mech"
We consider a chemical reaction network governed by mass action kinetics and composed of N different species which can reversibly form heterodimers. A fast iterative algorithm is introduced to compute the equilibrium concentrations of such networks. We show that the convergence is guaranteed by the
The Abelian Sandpile generates complex and beautiful patterns and seems to display allometry. On the plane, beyond patches, patterns periodic in both dimensions, we remark the presence of structures periodic in one dimension, that we call strings. We classify completely their constituents in terms o
An error correcting code using a tree-like multilayer perceptron is proposed. An original message $mbi{s}^0$ is encoded into a codeword $boldmath{y}_0$ using a tree-like committee machine (committee tree) or a tree-like parity machine (parity tree). Based on these architectures, several schemes feat
The evolutionary dynamics of the Public Goods game addresses the emergence of cooperation within groups of individuals. However, the Public Goods game on large populations of interconnected individuals has been usually modeled without any knowledge about their group structure. In this paper, by focu
Generalizations of the q-Onsager algebra are introduced and studied. In one of the simplest case and q=1, the algebra reduces to the one proposed by Uglov-Ivanov. In the general case and $qneq 1$, an explicit algebra homomorphism associated with coideal subalgebras of quantum affine Lie algebras (si
In this article we review the basic concepts regarding quantum integrability. Special emphasis is given on the algebraic content of integrable models. The associated algebras are essentially described by the Yang-Baxter and boundary Yang-Baxter equations depending on the choice of boundary condition
A demonic being, introduced by Maxwell, to miraculously create thermal non-equilibrium and violate the Second law of thermodynamics, has been among the most intriguing and elusive wishful concepts for over 150 years. Maxwell and his followers focused on 'effortless gating' a molecule at a time, but
We present a complete-quantum description of multi-particle Szilard engine which consists of a working substance and a Maxwell's demon. The demon is modeled as a multi-level quantum system with specific quantum control and the working substance consists of identical particles obeying Bose-Einstein o
Adiabatic quantum annealing is a paradigm of analog quantum computation, where a given computational job is converted to the task of finding the global minimum of some classical potential energy function and the search for the global potential minimum is performed by employing external kinetic quant
The development of single-cell technologies provides the opportunity to identify new cellular states and reconstruct novel cell-to-cell relationships. Applications range from understanding the transcriptional and epigenetic processes involved in metazoan development to characterizing distinct cells
We have studied the damage spreading (defined in the text) in the 'sandpile' model of self organised criticality. We have studied the variations of the critical time (defined in the text) and the total number of sites damaged at critical time as a function of system size. Both shows the power law va
This article discusses partition function of monatomic ideal gas which is given in Statistical Physisc at Physics Department, Faculty of Mathematics and Natural Sciences, Institut Teknologi Bandung, Indonesia. Students in general are not familiar with partition function. This unfamiliarness was dete
Nuclear pore complexes (NPCs) are very selective filters that monitor the transport between the cytoplasm and the nucleoplasm. Two models have been suggested for the plug of the NPC. They are (i) it is a reversible hydrogel or (ii) it is a polymer brush. We propose a mesoscopic model for the transpo
A simple one-dimensional spring-block model elaborated for the idealized single-lane highway traffic reveals the causes for the emergence of traffic jams. Based on the stop-time statistics of one car in the row, an order parameter is defined and studied. By extensive computer simulations, the parame
The concept of entropy rate for a dynamical process on a graph is introduced. We study diffusion processes where the node degrees are used as a local information by the random walkers. We describe analitically and numerically how the degree heterogeneity and correlations affect the diffusion entropy
A recent paper by T. Dauxois entitled 'Non-Gaussian distributions under scrutiny' is submitted to scrutiny. Several comments on its content are made, which constitute, at the same time, a brief state-of-the-art review of nonextensive statistical mechanics, a current generalization of the Boltzmann-G
The BFW model introduced by Bohman, Frieze, and Wormald [Random Struct. Algorithms, 25, 432 (2004)] and recently investigated in the framework of discontinuous percolation by Chen and D'Souza [Phys. Rev. Lett., 106, 115701 (2011)], is studied on the square and simple-cubic lattices. In two and three
A noncolliding diffusion process is a conditional process of $N$ independent one-dimensional diffusion processes such that the particles never collide with each other. This process realizes an interacting particle system with long-ranged strong repulsive forces acting between any pair of particles.
We study a general class of nonlinear mean field Fokker-Planck equations in relation with an effective generalized thermodynamical formalism. We show that these equations describe several physical systems such as: chemotaxis of bacterial populations, Bose-Einstein condensation in the canonical ensem
We present a mathematical analysis of records drawn from independent random variables with a drifting mean. To leading order the change in the record rate is proportional to the ratio of the drift velocity to the standard deviation of the underlying distribution. We apply the theory to time series o
Synthesis of protein molecules in a cell are carried out by ribosomes. A ribosome can be regarded as a molecular motor which utilizes the input chemical energy to move on a messenger RNA (mRNA) track that also serves as a template for the polymerization of the corresponding protein. The forward move
We investigate how simultaneously recorded long-range power-law correlated multi-variate signals cross-correlate. To this end we introduce a two-component ARFIMA stochastic process and a two-component FIARCH process to generate coupled fractal signals with long-range power-law correlations which are
In these two papers, we solve the N body 1D harmonically trapped spinless Boson or spin 1/2 Fermions with repulsive delta function interaction in the limit $Nto infty$.
Model of the degenerated weakly non-ideal Bose gas is considered without suggestion on C-number representation of the creation and annihilation operators with zero momentum. The 'density-density' correlation function and the one-particle Green function are calculated on basis of the suggestion about
We introduce some multiple integrals that are expected to have the same singularities as the singularities of the $ n$-particle contributions $chi^{(n)}$ to the susceptibility of the square lattice Ising model. We find the Fuchsian linear differential equation satisfied by these multiple integrals f
In this article we exploit the Bhattacharyya statistical divergence to determine the similarity of probability distributions of quantum observables. After brief review of useful characteristics of the Bhattacharyya divergence we apply it to determine the similarity of probability distributions of tw
Conjectures are made for the ground state energy of a large spin 1/2 Fermion system trapped in a 1D harmonic trap with delta function interaction. States with different spin J are separately studied. The Thomas-Fermi method is used as an effective test for the conjecture.
Finding the optimal assignment in budget-constrained auctions is a combinatorial optimization problem with many important applications, a notable example being the sale of advertisement space by search engines (in this context the problem is often referred to as the off-line AdWords problem). Based
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